qTeller: Maize
header broken
qTeller: Maize

Hi Folks! This is maize data using RefGen Version4.

Be aware that as of Jan,2017 Maize qTeller now uses a new set of alignments and FPKM values from maize refgen 4. These values are likely to be different results downloaded prior to Jan,2017. You can find RefGen V3 maize data 3 at http://qteller.com/qteller3/

For questions or concerns please contact Daniel W. C. Ngu of the Schnable lab.

Welcome to qTeller, the simple tool for digging up information on the genes hiding inside your favorite QTL or mutant mapping interval.

Links are to the publications in which different data sets were first published.

Paste gene IDs here. One gene per row.

Just show me everything <-- If you check this don't check any other boxes

Functional Data:
Expression Data Sources:
Anthers (Davidson 2011)Developing Ear (Davidson 2011)Embryo 25DAP (Davidson 2011)
Endosperm 25DAP (Davidson 2011)Ovule2 (Davidson 2011)Pollen (Davidson 2011)
Mature Tassel (Davidson 2011)Seed 5DAP (Davidson 2011)Seed 10DAP (Davidson 2011)
Silk (Davidson 2011)Developing Tassel (Davidson 2011)Ear (Davidson 2011)
Seedling leaves field (Davidson 2011)Seedling leaves grow chamber (Davidson 2011)Bundle Sheath Cells (Li 2010)
Developing Leaf (Li 2010)Mature Leaf (Li 2010)Mesophyll Cells (Li 2010)
Pollen1 (Chettoor 2014)Maize Seedling (Chettoor 2014)Maize Ovule (Chettoor 2014)
Embryo Sac (Chettoor 2014)Seedling Roots (Wang 2009)Seedling Shoots (Wang 2009)
Embryo 14DAP (Waters 2011)Endosperm 14DAP (Waters 2011)Ovaries 1 DAP (Kakumanu 2012)
Ovaries Drought Stressed (Kakumanu 2012)Leaf Meristems (Kakumanu 2012)Leaf Meristems Drought Stressed (Kakumanu 2012)
Ear primordia (Bolduc 2012)Leaf primordia (Bolduc 2012)Tassel primordia (Bolduc 2012)
Shoot apex (Bolduc 2012)Bundle Sheath Cells2 (Chang 2012)Mesophyll Cells2 (Chang 2012)
P6_lg1_1 (Johnston)P6_lg1_2 (Johnston)P6_lg1_3 (Johnston)
P6_wt1 (Johnston)P6_wt2 (Johnston)P6_wt3 (Johnston)
P7_blade1 (Johnston)P7_blade2 (Johnston)P7_blade3 (Johnston)
P7_blade_L1_1 (Johnston)P7_blade_L1_2 (Johnston)P7_blade_L1_3 (Johnston)
P7_ligule1 (Johnston)P7_ligule2 (Johnston)P7_ligule3 (Johnston)
P7_ligule_L1_1 (Johnston)P7_ligule_L1_2 (Johnston)P7_ligule_L1_3 (Johnston)
P7_sheath1 (Johnston)P7_sheath2 (Johnston)P7_sheath3 (Johnston)
P7_sheath_L1_1 (Johnston)P7_sheath_L1_2 (Johnston)P7_sheath_L1_3 (Johnston)
Whole_seedling_one_day_cold_treat_1 (Zhang(Schnable lab))Whole_seedling_one_day_cold_treat_2 (Zhang(Schnable lab))Whole_seedling_one_day_cold_treat_3 (Zhang(Schnable lab))
Whole_seedling_control_1 (Zhang(Schnable lab))Whole_seedling_control_2 (Zhang(Schnable lab))Whole_seedling_control_3 (Zhang(Schnable lab))

Syntenic Orthologs:
GEvo Link (compare all orthologs)